Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27140
carbon source	Putrescine (C)	-6.1
carbon source	Putrescine (C)	-4.9
nitrogen source	Putrescine (N)	-4.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.8
carbon source	L-Arginine (C)	-1.7
carbon source	L-Arginine (C)	-1.5
soil	soil sample 8; outgrowth in LB	-1.5
soil	soil sample 5; outgrowth in LB	-1.3
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-1.0
phage	JP1 MOI 10	-1.0
nitrogen source	Adenine (N)	-0.9
solid stress	Fraxetin 2 mM; solid stress	-0.9
soil	soil sample 6; outgrowth in LB	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
solid stress	Scopoletin 1 mM; solid stress	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
solid stress	Fraxetin 2 mM; solid stress	-0.7
liquid stress	80% Methanol 3 mM; liquid stress	-0.7
liquid stress	Fraxetin 3 mM; liquid stress	-0.7
phage	JP1 MOI 1	-0.7
seeds	Growth on radish seeds for 24 hours	+0.7
phage	P. simiae OR Antrim MOI 1	+0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8
agar plate interaction control	Taped volatile agar plate with no fungus	+1.0
carbon source	L-Valine (C)	+1.2
solid stress	Fraxetin 3 mM; solid stress	+1.2
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