Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_26820
carbon source	Trisodium citrate (C)	-1.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.9
carbon source	Trisodium citrate (C)	-0.9
solid stress	Fraxetin 3 mM; solid stress	-0.8
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.7
stress	Doxycycline hyclate 0.001 mg/ml	-0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.7
seeds	Growth on radish seeds for 72 hours	-0.7
motility	outer cut, LB soft agar motility assay	-0.7
solid stress	Fraxetin 3 mM; solid stress	-0.6
soil	soil sample 3; outgrowth in LB	-0.6
soil	soil sample 7; outgrowth in LB	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.6
solid stress	Fraxetin 3 mM; solid stress	-0.6
stress	Spectinomycin 0.4 mg/ml	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
stress	Gentamicin 0.008 mg/ml	-0.5
motility	inner cut, LB soft agar motility assay	-0.5
solid stress	Fraxetin 3 mM; solid stress	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
motility	outer cut, LB soft agar motility assay	-0.5
phage	P. simiae OR Antrim MOI 1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
carbon source	L-Valine (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
seeds	Growth on radish seeds for 72 hours	+0.7
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