Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_25765
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7
carbon source 2'-Deoxyinosine 5 mM (C) -1.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6
rhizosphere rhizosphere sample 1; outgrowth in LB -1.4
phage P. simiae Grant Run MOI 10 -1.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3
solid stress Fraxetin 3 mM; solid stress -1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1
solid stress Fraxetin 3 mM; solid stress -1.0
solid stress Fraxetin 3 mM; solid stress -1.0
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0
carbon source Ethanol (C) -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0
liquid stress Fraxetin 3 mM; liquid stress -0.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.9
liquid stress Fraxetin 2 mM; liquid stress -0.9
carbon source Carbon source D-Mannitol 5 mM -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9
rhizosphere rhizosphere sample 2; outgrowth in LB +1.0
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0
stress methylglyoxal 0.032 vol% +1.0
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3
stress Neomycin 0.04 mg/ml +1.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.0
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PS417_25765