Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_25110
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
soil	soil sample 6; outgrowth in LB	-0.6
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
phage	P. simiae ORA MOI 0.1	-0.5
carbon source	Putrescine (C)	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.5
carbon source	Fumarate (C)	-0.4
carbon source	L-Citrulline (C)	+0.5
stress	Chloramphenicol 0.0075 mg/ml	+0.5
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
carbon source	L-Valine (C)	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.5
stress	Tetracycline 0.001 mg/ml	+0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
stress	methylglyoxal 0.032 vol%	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
stress	Gentamicin 0.008 mg/ml	+0.7
stress	Doxycycline hyclate 0.001 mg/ml	+0.7
phage	Wcs_1	+0.9
		remove PS417_25110