Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24580
soil	soil sample 7; outgrowth in LB	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
soil	soil sample 3; outgrowth in LB	-1.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.0
root	root sample 6; outgrowth in LB	-1.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
carbon source	Carbon source D-Mannitol 5 mM	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
stress	Choline chloride 300 mM	-0.7
nophagecontrol	TIme6-nophage	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
stress	Doxycycline hyclate 0.001 mg/ml	+0.7
carbon source	L-Valine (C)	+0.7
phage	P. simiae OR Antrim MOI 1	+0.7
liquid stress	Fraxetin 3 mM; liquid stress	+0.7
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7
stress	Nalidixic 0.025 mg/ml	+0.8
stress	Neomycin 0.04 mg/ml	+0.8
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9
phage	P. simiae Grant Run MOI 10	+0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9
stress	Gentamicin 0.008 mg/ml	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.3
		remove PS417_24580