Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24445
phage	JP1 MOI 1	-0.4
stress	Gentamicin 0.008 mg/ml	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1	-0.3
root	root sample 6; outgrowth in LB	-0.3
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.3
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.3
stress	LB_noSalt with Chloride 1100 mM	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
phage	P. simiae OR Antrim MOI 10	-0.2
no stress control	TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 1	-0.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2
phage	P. simiae ORA MOI 10	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2
phage	JP1 MOI 1	-0.2
carbon source	L-Valine (C)	-0.2
carbon source	D,L-Lactate (C)	+0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2
seeds	Growth on radish seeds for 72 hours	+0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2
seeds	Growth on radish seeds for 72 hours	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
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