Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24365
phage	JP1 MOI 1	-1.1
seeds	Growth on radish seeds for 72 hours	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7
stress	L-Lysine 60 mM	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
seeds	Growth on radish seeds for 72 hours	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
motility	outer cut, LB soft agar motility assay	-0.6
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5
stress	Polymyxin B sulfate 0.006 mg/ml	-0.5
phage	P. simiae ORA MOI 10	-0.5
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.5
motility	inner cut, LB soft agar motility assay	-0.5
stress	Doxycycline hyclate 0.001 mg/ml	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
phage	P. simiae ORA MOI 1	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
carbon source	L-Leucine (C)	+0.5
phage moi 100	Time6-phageFRS	+0.5
liquid stress	80% Methanol 3 mM; liquid stress	+0.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9
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