Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24200
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.0
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.6
carbon source	L-Valine (C)	-0.6
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
phage	JP1 MOI 0.1	-0.6
carbon source	D-Galactose (C)	-0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
soil	soil sample 3; outgrowth in LB	+0.5
carbon source	2'-Deoxyinosine 5 mM (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6
phage	P. simiae OR Antrim MOI 1	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.7
phage	JP1 MOI 10	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.7
phage	P. simiae OR1 MOI 0.1	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.8
stress	LB_noSalt with Chloride 1100 mM	+0.8
phage	P. simiae OR Antrim MOI 0.1	+0.9
stress	methylglyoxal 0.032 vol%	+0.9
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