Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23775
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-4.1
stress	Spectinomycin 0.4 mg/ml	-4.0
stress	methylglyoxal 0.032 vol%	-3.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-3.8
motility	inner cut, LB soft agar motility assay	-3.8
stress	Gentamicin 0.008 mg/ml	-3.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-3.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.9
carbon source	2-Deoxy-D-Ribose (C)	-2.8
motility	outer cut, LB soft agar motility assay	-2.8
phage	Wcs_1	-2.7
nitrogen source	Adenine (N)	-2.6
carbon source	L-Isoleucine (C)	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.4
motility	inner cut, LB soft agar motility assay	-2.4
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-2.4
agar plate interaction control	Taped volatile agar plate with no fungus	-2.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.4
motility	outer cut, LB soft agar motility assay	-2.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.3
stress	R2A with Fusaric 120 ug/mL	-2.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.2
stress	6-methoxy-2(3H)-benzoxazolone 2.5 mM	-2.2
phage	JP1 MOI 10	+2.3
phage	JP1 MOI 1	+3.1
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