Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02370
soil	soil sample 3; outgrowth in LB	-2.0
agar plate interaction control	Taped volatile agar plate with no fungus	-1.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
carbon source	Putrescine (C)	-1.0
supernatant control	Vogels_fungal_media 0.1X	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
solid stress	Scopoletin 2 mM; solid stress	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.9
carbon source	D-Glucose (C)	+0.9
liquid stress	Fraxetin 2 mM; liquid stress	+0.9
nitrogen source	Inosine (N)	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.9
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.9
soil	soil sample 7; outgrowth in LB	+1.0
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
carbon source	Carbon source L-Citrulline 10 mM	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
soil	soil sample 6; outgrowth in LB	+1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	+2.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	+2.2
root	root sample 6; outgrowth in LB	+3.0
		remove PS417_02370