Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23615
solid stress	Fraxetin 3 mM; solid stress	-2.4
soil	soil sample 7; outgrowth in LB	-2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-1.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
liquid stress	Scopoletin 3 mM; liquid stress	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
carbon source	Carbon source D-Mannitol 10 mM	-1.0
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
carbon source	acetate (C)	-1.0
phage	Wcs_0.1	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
carbon source	L-Valine (C)	-0.9
solid stress	Fraxetin 2 mM; solid stress	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
carbon source	D-Galacturonic Acid (C)	-0.8
carbon source	Xylitol (C)	-0.8
supernatant control	Vogels_fungal_media 0.1X	+0.8
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
phage	P. simiae Grant Run MOI 0.1	+1.0
phage	P. simiae ORA MOI 0.1	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.1
agar plate interaction control	Taped volatile agar plate with no fungus	+1.1
phage	JP1 MOI 1	+1.2
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