Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23250
soil	soil sample 4; outgrowth in LB	-3.5
soil	soil sample 6; outgrowth in LB	-2.7
soil	soil sample 5; outgrowth in LB	-2.7
soil	soil sample 2; outgrowth in LB	-2.4
soil	soil sample 8; outgrowth in LB	-2.3
soil	soil sample 3; outgrowth in LB	-2.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.8
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.7
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.4
soil	soil sample 7; outgrowth in LB	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.4
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.3
liquid stress	Fraxetin 3 mM; liquid stress	-1.3
carbon source	2-Deoxy-D-Ribose (C)	-1.2
carbon source	2-Deoxy-D-Ribose (C)	-1.2
stress	Gentamicin 0.008 mg/ml	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
liquid stress	Fraxetin 3 mM; liquid stress	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.9
stress	Doxycycline hyclate 0.001 mg/ml	+1.3
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