Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_23205
stress Gentamicin 0.008 mg/ml -2.1
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.7
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5
rhizosphere rhizosphere sample 2; outgrowth in LB -1.4
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3
phage P. simiae OR Antrim MOI 0.1 -1.3
root root sample 6; outgrowth in LB -1.3
soil soil sample 8; outgrowth in LB -1.2
no stress control on plate growth on LB_noSalt plate -1.2
phage JP1 MOI 10 -1.2
phage JP1 MOI 1 -1.2
carbon source 2'-Deoxyinosine 5 mM (C) -1.2
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1
phage P. simiae OR Antrim MOI 1 -1.1
motility inner cut, LB soft agar motility assay -1.1
liquid stress Fraxetin 3 mM; liquid stress +1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2
stress R2A with Fusaric 120 ug/mL +1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5
stress R2A with Fusaric 120 ug/mL +1.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.5
stress R2A with Fusaric 120 ug/mL +1.6
stress R2A with Fusaric 120 ug/mL +1.7
stress R2A with Fusaric 120 ug/mL +1.9
stress R2A with Fusaric 120 ug/mL +2.1
stress Cobalt chloride 0.16 mM +2.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.8
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PS417_23205