Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23045
carbon source	D-Trehalose (C)	-5.4
carbon source	D-Trehalose (C)	-3.4
phage	P. simiae Grant Run MOI 10	-2.1
phage	Wcs_0.1	-1.4
seeds	Growth on radish seeds for 72 hours	-1.4
soil	soil sample 5; outgrowth in LB	-1.3
stress	2-Furfuraldehyde 0.06 vol%	-1.3
soil	soil sample 2; outgrowth in LB	-1.2
carbon source	2-Deoxy-D-Ribose (C)	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
stress	methylglyoxal 0.032 vol%	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
phage	Wcs_1	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.8
carbon source	D-Glucose-6-Phosphate (C)	+0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
stress	R2A with Fusaric 120 ug/mL	+0.8
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
stress	R2A with Fusaric 120 ug/mL	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+1.0
stress	R2A with Fusaric 120 ug/mL	+1.0
carbon source	2'-Deoxyinosine 5 mM (C)	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+1.3
root	root sample 6; outgrowth in LB	+1.3
		remove PS417_23045