Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_23035
carbon source	D-Trehalose (C)	-3.9
carbon source	D-Trehalose (C)	-3.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
stress	methylglyoxal 0.032 vol%	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
stress	Doxycycline hyclate 0.001 mg/ml	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
phage	P. simiae Grant Run MOI 0.1	-0.5
stress	6-methoxy-2(3H)-benzoxazolone 0.5 mM	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	+0.5
solid stress	Fraxetin 2 mM; solid stress	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.5
phage	JP1 MOI 1	+0.5
solid stress	Fraxetin 3 mM; solid stress	+0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.5
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.6
phage	P. simiae OR Antrim MOI 0.1	+0.6
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.6
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.8
solid stress	Fraxetin 3 mM; solid stress	+0.8
agar plate interaction control	Taped volatile agar plate with no fungus	+0.8
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