Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_22640
carbon source	a-Ketoglutaric (C)	-2.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.7
seeds	Growth on radish seeds for 72 hours	-1.4
carbon source	a-Ketoglutaric (C)	-1.4
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.2
phage	JP1 MOI 1	-1.0
carbon source	D-Sorbitol (C)	-1.0
motility	inner cut, LB soft agar motility assay	-1.0
phage	JP1 MOI 10	-0.9
stress	Choline chloride 300 mM	-0.9
nitrogen source	Inosine (N)	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	succinate (C)	-0.8
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.8
phage	JP1 MOI 1	-0.8
seeds	Growth on radish seeds for 72 hours	-0.8
stress	Gentamicin 0.008 mg/ml	+0.8
liquid stress	80% Methanol 3 mM; liquid stress	+0.8
liquid stress	Fraxetin 3 mM; liquid stress	+0.8
carbon source	L-Valine (C)	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
agar plate interaction control	Taped volatile agar plate with no fungus	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
seeds	Growth on radish seeds for 72 hours	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
stress	2-Furfuraldehyde 0.03 vol%	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1
phage	P. simiae OR1 MOI 0.1	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
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