Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_22630
soil	soil sample 2; outgrowth in LB	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.3
soil	soil sample 3; outgrowth in LB	-1.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.2
phage	P. simiae OR Antrim MOI 0.1	-1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.1
seeds	Growth on radish seeds for 72 hours	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
liquid stress	80% Methanol 3 mM; liquid stress	-1.0
solid stress	Fraxetin 3 mM; solid stress	+0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.0
phage	P. simiae ORA MOI 1	+1.0
rhizosphere	rhizosphere sample 8; outgrowth in LB	+1.0
agar plate interaction control	Taped volatile agar plate with no fungus	+1.0
stress	Spectinomycin 0.4 mg/ml	+1.0
nophagecontrol	TIme6-nophage	+1.1
soil	soil sample 6; outgrowth in LB	+1.1
root	root sample 6; outgrowth in LB	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2
stress	Gentamicin 0.008 mg/ml	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5
carbon source	L-Valine (C)	+1.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	+1.9
phage	JP1 MOI 10	+2.0
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