Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21905
phage	P. simiae OR Antrim MOI 0.1	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6
phage	P. simiae OR1 MOI 0.1	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
soil	soil sample 5; outgrowth in LB	-0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.4
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	-0.4
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 500 uM; timepoint 1	-0.4
phage	JP1 MOI 10	-0.4
solid stress	Fraxetin 3 mM; solid stress	-0.4
seeds	Growth on radish seeds for 24 hours	-0.4
carbon source	2-Deoxy-D-Ribose (C)	-0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.4
stress	Cobalt chloride 0.16 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
motility	inner cut, LB soft agar motility assay	+0.4
solid stress	80% Methanol 1 mM; solid stress	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
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