Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21780
soil	soil sample 2; outgrowth in LB	-1.9
liquid stress	Fraxetin 3 mM; liquid stress	-1.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
solid stress	Fraxetin 3 mM; solid stress	-1.0
phage	JP1 MOI 10	-1.0
phage moi 100	Time6-phageFRS	-0.9
motility	inner cut, LB soft agar motility assay	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
phage	P. simiae OR Antrim MOI 1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
carbon source	Carbon source D-Mannitol 2.5 mM	-0.8
stress	Spectinomycin 0.4 mg/ml	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
liquid stress	Scopoletin 2 mM; liquid stress	-0.8
soil	soil sample 5; outgrowth in LB	+0.8
carbon source	2-Deoxy-D-Ribose (C)	+0.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.8
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.8
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.8
solid stress	80% Methanol 2 mM; solid stress	+0.9
carbon source	D-Glucosamine Hydrochloride (C)	+0.9
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.4
seeds	Growth on radish seeds for 72 hours	+1.6
		remove PS417_21780