Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21470
stress	Gentamicin 0.008 mg/ml	-0.5
stress	L-Lysine 60 mM	-0.5
seeds	Growth on radish seeds for 72 hours	-0.4
phage	JP1 MOI 10	-0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.3
stress	Choline Lysine 25 mM	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	-0.3
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3
motility	outer cut, LB soft agar motility assay	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2
soil	soil sample 8; outgrowth in LB	+0.2
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
motility	inner cut, LB soft agar motility assay	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3
soil	soil sample 6; outgrowth in LB	+0.3
stress	methylglyoxal 0.032 vol%	+0.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.4
soil	soil sample 2; outgrowth in LB	+0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.5
root	root sample 6; outgrowth in LB	+0.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.7
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