Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_21325
agar plate interaction control	Taped volatile agar plate with no fungus	-1.2
soil	soil sample 7; outgrowth in LB	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
seeds	Growth on radish seeds for 72 hours	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.7
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6
nophagecontrol	TIme6-nophage	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
phage	JP1 MOI 10	-0.6
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.6
phage	P. simiae OR Antrim MOI 1	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.5
carbon source	Putrescine (C)	+0.6
carbon source	Cytidine (C)	+0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.6
carbon source	Putrescine (C)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
motility	inner cut, LB soft agar motility assay	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
phage moi 100	Time6-phageFRS	+0.7
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.7
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.7
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.7
stress	R2A with Fusaric 120 ug/mL	+0.8
soil	soil sample 3; outgrowth in LB	+0.8
phage	JP1 MOI 1	+0.8
soil	soil sample 6; outgrowth in LB	+0.8
carbon source	L-Valine (C)	+1.8
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