Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20880
phage	JP1 MOI 1	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8
phage	JP1 MOI 10	-2.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.3
stress	Cisplatin 0.01 mg/ml	-1.9
liquid stress	Scopoletin 3 mM; liquid stress	-1.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.6
phage	P. simiae ORA MOI 0.1	-1.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.6
phage	JP1 MOI 1	-1.6
motility	inner cut, LB soft agar motility assay	-1.6
stress	nitrate 200 mM	-1.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.5
motility	inner cut, LB soft agar motility assay	-1.5
liquid stress	80% Methanol 2 mM; liquid stress	-1.4
stress	Choline chloride 300 mM	-1.4
motility	outer cut, LB soft agar motility assay	-1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
no phage control	Time6-nophage	+1.2
phage moi 100	Time6-phageFRS	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.8
carbon source	octanoate (C)	+1.9
carbon source	octanoate (C)	+1.9
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