Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20825
phage	JP1 MOI 1	-2.0
stress	Gentamicin 0.008 mg/ml	-1.7
phage	JP1 MOI 10	-1.5
supernatant control	Vogels_fungal_media 0.1X	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
stress	Phosphomycin 0.003 mg/ml	-1.2
stress	Choline Lysine 25 mM	-1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.1
carbon source	Carbon source L-Ornithine 10 mM	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.1
soil	soil sample 7; outgrowth in LB	-1.0
stress	Tetracycline 0.001 mg/ml	-1.0
carbon source	Carbon source D-Mannitol 5 mM	-0.9
phage	P. simiae OR1 MOI 0.1	-0.9
solid stress	80% Methanol 0.5 mM; solid stress	-0.9
carbon source	Carbon source D-Mannitol 10 mM	-0.9
phage	P. simiae Grant Run MOI 0.1	-0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.9
solid stress	Fraxetin 1 mM; solid stress	+0.9
carbon source	L-Valine (C)	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
motility	inner cut, LB soft agar motility assay	+1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.4
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