Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20520
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.8
root	root sample 6; outgrowth in LB	-1.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-1.0
stress	Thallium(I) acetate 0.0625 mg/ml	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.9
supernatant control	Vogels_fungal_media; pH 5.5	-0.8
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.8
agar plate interaction control	Taped volatile agar plate with no fungus	-0.8
carbon source	Carbon source D-Mannitol 10 mM	-0.8
carbon source	D-Fructose (C)	-0.8
carbon source	Carbon source D-Mannitol 5 mM	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.8
carbon source	Carbon source L-Citrulline 10 mM	-0.8
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.8
carbon source	L-Valine (C)	+0.8
nitrogen source	Urea (N)	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
nitrogen source	Inosine (N)	+0.8
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.9
nitrogen source	Ammonium chloride (N)	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.9
solid stress	80% Methanol 2 mM; solid stress	+1.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
solid stress	Fraxetin 2 mM; solid stress	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.1
solid stress	Fraxetin 2 mM; solid stress	+1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.8
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