Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02030
seeds	Growth on radish seeds for 72 hours	-0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.8
phage	P. simiae Grant Run MOI 10	-0.8
soil	soil sample 5; outgrowth in LB	-0.8
phage	JP1 MOI 1	-0.7
phage	P. simiae Grant Run MOI 0.1	-0.7
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
liquid stress	Scopoletin 3 mM; liquid stress	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
carbon source	Gly-Glu (C)	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
carbon source	D-Ribose (C)	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
solid stress	Fraxetin 2 mM; solid stress	+0.6
carbon source	L-Citrulline (C)	+0.6
carbon source	Carbon source D-Mannitol 2.5 mM	+0.6
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
stress	Polymyxin B sulfate 0.006 mg/ml	+0.6
agar plate interaction control	Taped volatile agar plate with no fungus	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
stress	Choline chloride 300 mM	+0.7
carbon source	2'-Deoxyinosine 5 mM (C)	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.3
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