Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_20170
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.6
seeds	Growth on radish seeds for 72 hours	-1.5
soil	soil sample 4; outgrowth in LB	-1.5
stress	methylglyoxal 0.032 vol%	-1.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
stress	Gentamicin 0.008 mg/ml	-1.1
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-1.1
carbon source	L-Valine (C)	-1.1
phage	JP1 MOI 10	-1.1
motility	outer cut, LB soft agar motility assay	-1.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
soil	soil sample 6; outgrowth in LB	-1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.0
phage	JP1 MOI 10	-1.0
liquid stress	Scopoletin 1 mM; liquid stress	-0.9
nitrogen source	Cytosine (N)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.9
root	root sample 6; outgrowth in LB	-0.9
stress	Tetracycline 0.001 mg/ml	-0.9
nitrogen source	Adenine (N)	-0.9
carbon source	L-Isoleucine (C)	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9
phage	JP1 MOI 1	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
agar plate interaction control	Taped volatile agar plate with no fungus	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4
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