Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_19520
ecofab	LB in EcoFAB_3.5mL	-1.6
solid stress	Fraxetin 2 mM; solid stress	-1.4
solid stress	80% Methanol 0.5 mM; solid stress	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
liquid stress	80% Methanol 2 mM; liquid stress	-1.2
carbon source	octanoate (C)	-1.2
stress	R2A with Fusaric 120 ug/mL	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
seeds	Growth on radish seeds for 72 hours	-1.2
motility	inner cut, LB soft agar motility assay	-1.1
carbon source	2'-Deoxyinosine 5 mM (C)	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
stress	methylglyoxal 0.032 vol%	-1.0
phage	P. simiae Grant Run MOI 0.1	-1.0
carbon source	L-Valine (C)	-1.0
carbon source	octanoate (C)	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
motility	outer cut, LB soft agar motility assay	-0.9
liquid stress	Scopoletin 1 mM; liquid stress	-0.9
soil	soil sample 8; outgrowth in LB	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
seeds	Growth on radish seeds for 72 hours	+0.9
stress	Gentamicin 0.008 mg/ml	+0.9
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.0
no phage control	Time6-nophage	+1.0
phage	JP1 MOI 1	+1.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.1
phage	JP1 MOI 0.1	+1.2
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