Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_19270
phage JP1 MOI 10 -1.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1
stress Doxycycline hyclate 0.001 mg/ml -1.1
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.9
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9
phage P. simiae Grant Run MOI 0.1 -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8
stress R2A with Fusaric 120 ug/mL -0.8
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.7
solid stress 80% Methanol 3 mM; solid stress +0.7
carbon source D-Glucosamine Hydrochloride (C) +0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8
motility inner cut, LB soft agar motility assay +0.8
agar plate interaction control Taped volatile agar plate with no fungus +0.8
carbon source L-Valine (C) +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6
phage JP1 MOI 10 +1.8
phage JP1 MOI 1 +2.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.0
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PS417_19270