Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_19140
nophagecontrol	Only library	-0.7
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.5
solid stress	Fraxetin 2 mM; solid stress	-0.5
carbon source	octanoate (C)	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
solid stress	Fraxetin 2 mM; solid stress	-0.4
stress	R2A with Fusaric 120 ug/mL	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
solid stress	Fraxetin 3 mM; solid stress	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
solid stress	Fraxetin 3 mM; solid stress	-0.4
carbon source	L-Leucine (C)	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	+0.4
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
soil	soil sample 5; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5
soil	soil sample 4; outgrowth in LB	+0.5
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.5
stress	Gentamicin 0.008 mg/ml	+0.6
soil	soil sample 3; outgrowth in LB	+0.7
soil	soil sample 7; outgrowth in LB	+0.7
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.7
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
root	root sample 6; outgrowth in LB	+1.0
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