Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_19090
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4
phage	P. simiae Grant Run MOI 10	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
soil	soil sample 3; outgrowth in LB	-0.9
carbon source	Carbon source D-Mannitol 2.5 mM	-0.8
carbon source	Carbon source D-Mannitol 5 mM	-0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
stress	Phosphomycin 0.003 mg/ml	-0.6
liquid stress	Fraxetin 3 mM; liquid stress	-0.6
liquid stress	Fraxetin 2 mM; liquid stress	-0.6
liquid stress	Fraxetin 1 mM; liquid stress	-0.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6
stress	R2A with Fusaric 120 ug/mL	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
carbon source	L-Citrulline (C)	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.8
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.8
phage	P. simiae Grant Run MOI 10	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
soil	soil sample 5; outgrowth in LB	+1.0
stress	methylglyoxal 0.032 vol%	+1.4
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