Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_18750
seeds	Growth on radish seeds for 72 hours	-0.5
soil	soil sample 6; outgrowth in LB	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	L-Leucine (C)	-0.5
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.5
stress	Paraquat dichloride 0.008 mg/ml	-0.4
carbon source	succinate (C)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.4
stress	methylglyoxal 0.032 vol%	+0.4
phage	P. simiae Grant Run MOI 10	+0.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.4
phage	P. simiae OR Antrim MOI 0.1	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5
phage	P. simiae ORA MOI 0.1	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.6
phage	P. simiae OR Antrim MOI 10	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0
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