Fitness for 1 genes in Pseudomonas simiae WCS417

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Group Condition PS417_18370
liquid stress Fraxetin 3 mM; liquid stress -1.8
phage JP1 MOI 1 -1.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1
liquid stress Fraxetin 2 mM; liquid stress -1.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x -0.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9
supernatant control Vogels_fungal_media 0.1X +0.9
agar plate interaction control Taped volatile agar plate with no fungus +0.9
seeds Growth on radish seeds for 72 hours +0.9
phage JP1 MOI 1 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9
soil soil sample 2; outgrowth in LB +1.0
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0
carbon source L-Valine (C) +1.0
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.2
phage P. simiae Grant Run MOI 10 +1.3
stress 1-ethyl-3-methylimidazolium acetate 35 mM +1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.4
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7
agar plate interaction control Taped volatile agar plate with no fungus +2.1
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PS417_18370