Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01825
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.3
soil	soil sample 5; outgrowth in LB	-1.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.2
root	root sample 6; outgrowth in LB	-1.2
motility	outer cut, LB soft agar motility assay	-1.1
stress	Tetracycline 0.001 mg/ml	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1
solid stress	Fraxetin 2 mM; solid stress	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.0
carbon source	Glycerol (C)	-1.0
no phage control	Time6-nophage	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.9
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.9
carbon source	RCH2_defined_glucose with MS_media 1x	-0.9
phage	P. simiae OR Antrim MOI 10	-0.8
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8
carbon source	Inosine (C)	+0.9
carbon source	L-Isoleucine (C)	+0.9
phage	JP1 MOI 10	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.0
phage	JP1 MOI 1	+1.1
phage	Wcs_1	+1.1
seeds	Growth on radish seeds for 72 hours	+1.2
nophagecontrol	Only library	+1.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5
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