Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_18270
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
solid stress	Fraxetin 2 mM; solid stress	-0.6
motility	inner cut, LB soft agar motility assay	-0.6
liquid stress	Scopoletin 3 mM; liquid stress	-0.6
stress	Tetracycline 0.001 mg/ml	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.5
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.4
phage	P. simiae ORA MOI 0.1	-0.4
phage	P. simiae OR Antrim MOI 0.1	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	-0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.4
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
carbon source	Gly-Glu (C)	+0.5
carbon source	L-Histidine (C)	+0.5
soil	soil sample 2; outgrowth in LB	+0.5
carbon source	L-Histidine (C)	+0.5
carbon source	succinate (C)	+0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.5
phage	JP1 MOI 10	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.0
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