Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17930
carbon source	2'-Deoxyinosine 5 mM (C)	-2.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-2.4
phage	P. simiae ORA MOI 0.1	-2.0
seeds	Growth on radish seeds for 72 hours	-1.6
phage	Wcs_1	-1.5
carbon source	Carbon source D-Mannitol 2.5 mM	-1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.4
phage	P. simiae Grant Run MOI 10	-1.3
carbon source	L-Valine (C)	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
phage	P. simiae Grant Run MOI 0.1	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.1
soil	soil sample 3; outgrowth in LB	-1.0
phage	JP1 MOI 0.1	-1.0
agar plate interaction control	Taped volatile agar plate with no fungus	-1.0
carbon source	2-Deoxy-D-Ribose (C)	-0.9
carbon source	Carbon source D-Mannitol 5 mM	-0.9
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.9
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.9
solid stress	80% Methanol 0.5 mM; solid stress	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
phage	P. simiae OR1 MOI 0.1	+0.9
soil	soil sample 6; outgrowth in LB	+0.9
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.9
solid stress	Fraxetin 3 mM; solid stress	+1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.3
seeds	Growth on radish seeds for 72 hours	+1.5
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