Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17835
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5
stress	Nalidixic 0.015 mg/ml	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.2
soil	soil sample 2; outgrowth in LB	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
phage	JP1 MOI 1	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0
carbon source	Carbon source D-Mannitol 2.5 mM	-0.9
supernatant control	Vogels_fungal_media; pH 5.5	-0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
no phage control	Time6-nophage	-0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.9
phage	P. simiae ORA MOI 0.1	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
soil	soil sample 4; outgrowth in LB	-0.9
r2a control	R2A control	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.7
soil	soil sample 7; outgrowth in LB	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
carbon source	Ethanol (C)	+0.8
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.8
carbon source	D,L-Lactate (C)	+0.8
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.8
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.9
stress	Lomefloxacin 0.0001 mM	+0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.0
phage	JP1 MOI 0.1	+1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.3
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