Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17585
carbon source	Carbon source L-Citrulline 10 mM	-3.8
carbon source	Carbon source L-Ornithine 10 mM	-3.6
carbon source	Carbon source L-Citrulline 5 mM	-3.5
carbon source	Carbon source L-Citrulline 5 mM	-3.5
carbon source	Carbon source L-Ornithine 5 mM	-3.4
carbon source	L-Citrulline (C)	-2.9
carbon source	Carbon source L-Ornithine 5 mM	-2.8
carbon source	Carbon source L-Citrulline 10 mM	-2.7
carbon source	L-Citrulline (C)	-2.5
carbon source	Carbon source L-Ornithine 10 mM	-2.1
carbon source	L-Valine (C)	-0.8
carbon source	L-Valine (C)	-0.7
seeds	Growth on radish seeds for 72 hours	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
motility	inner cut, LB soft agar motility assay	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
soil	soil sample 7; outgrowth in LB	-0.6
soil	soil sample 2; outgrowth in LB	-0.5
solid stress	Scopoletin 2 mM; solid stress	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1	+0.6
phage	JP1 MOI 1	+0.6
solid stress	Fraxetin 3 mM; solid stress	+0.6
supernatant control	Vogels_fungal_media 0.1X	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.1
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