Fitness for 1 genes in Pseudomonas simiae WCS417

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Group	Condition	PS417_17475
carbon source	Ethanol (C)	-1.7
carbon source	Ethanol (C)	-1.7
carbon source	Carbon source L-Citrulline 5 mM	-1.4
carbon source	Carbon source L-Citrulline 5 mM	-1.2
carbon source	L-Arginine (C)	-1.2
carbon source	Carbon source L-Citrulline 10 mM	-1.1
carbon source	Carbon source L-Citrulline 10 mM	-1.0
carbon source	L-Arginine (C)	-1.0
carbon source	acetate (C)	-0.9
carbon source	acetate (C)	-0.7
carbon source	Fumarate (C)	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
carbon source	Fumarate (C)	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
carbon source	Carbon source L-Ornithine 5 mM	-0.6
phage	JP1 MOI 10	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
seeds	Growth on radish seeds for 72 hours	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.5
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.5
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+1.2
		remove PS417_17475