Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17405
root	root sample 6; outgrowth in LB	-4.5
phage	Wcs_1	-2.6
seeds	Growth on radish seeds for 72 hours	-2.1
carbon source	2'-Deoxyinosine 5 mM (C)	-2.0
seeds	Growth on radish seeds for 72 hours	-2.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
soil	soil sample 2; outgrowth in LB	-1.2
carbon source	L-Valine (C)	-1.1
soil	soil sample 7; outgrowth in LB	-1.1
phage	P. simiae OR Antrim MOI 10	-1.0
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.0
liquid stress	Fraxetin 2 mM; liquid stress	-1.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.0
carbon source	acetate (C)	+1.0
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
carbon source	D-Glucose (C)	+1.1
soil	soil sample 5; outgrowth in LB	+1.1
phage	P. simiae Grant Run MOI 0.1	+1.1
solid stress	80% Methanol 2 mM; solid stress	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.6
phage	P. simiae OR Antrim MOI 0.1	+1.7
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