Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_17240
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-4.4
phage	P. simiae OR Antrim MOI 10	-3.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.1
soil	soil sample 6; outgrowth in LB	-3.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.5
agar plate interaction control	Taped volatile agar plate with no fungus	-2.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4
phage	P. simiae OR Antrim MOI 1	-2.4
phage	P. simiae OR Antrim MOI 0.1	-2.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-2.3
supernatant control	Vogels_fungal_media; pH 5.5	-2.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	-2.2
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-2.1
phage	P. simiae OR Antrim MOI 1	-2.1
motility	outer cut, LB soft agar motility assay	-2.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	-2.0
motility	inner cut, LB soft agar motility assay	-1.9
phage	P. simiae ORA MOI 1	-1.9
soil	soil sample 7; outgrowth in LB	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.8
ecofab	LB 0.5x in EcoFAB_3.5mL	-1.8
stress	Choline chloride 300 mM	-1.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.8
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.8
soil	soil sample 2; outgrowth in LB	-1.7
phage	JP1 MOI 10	-1.7
stress	methylglyoxal 0.032 vol%	+1.8
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