Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_16850
stress	Choline Lysine 25 mM	-3.1
stress	L-Lysine 60 mM	-2.5
phage	JP1 MOI 10	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.9
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.8
soil	soil sample 3; outgrowth in LB	-0.8
carbon source	L-Leucine (C)	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.7
phage	JP1 MOI 1	-0.7
soil	soil sample 7; outgrowth in LB	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7
carbon source	L-Valine (C)	+0.7
phage	P. simiae OR Antrim MOI 0.1	+0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.8
seeds	Growth on radish seeds for 72 hours	+0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.9
phage	JP1 MOI 0.1	+1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.0
agar plate interaction control	Taped volatile agar plate with no fungus	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.1
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.4
		remove PS417_16850