Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_16815
solid stress	Fraxetin 3 mM; solid stress	-2.0
stress	Gentamicin 0.008 mg/ml	-1.4
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
phage	JP1 MOI 10	-1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.1
seeds	Growth on radish seeds for 72 hours	-1.0
soil	soil sample 2; outgrowth in LB	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
stress	1-ethyl-3-methylimidazolium acetate 35 mM	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	+0.9
phage	P. simiae OR Antrim MOI 1	+1.0
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+1.1
phage	P. simiae Grant Run MOI 0.1	+1.1
soil	soil sample 5; outgrowth in LB	+1.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+1.3
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.9
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