Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_00165
carbon source	D-Galactose (C)	-3.7
carbon source	D-Galactose (C)	-3.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.6
agar plate interaction control	Taped volatile agar plate with no fungus	-0.6
phage	P. simiae ORA MOI 0.1	-0.6
carbon source	L-Arabinose (C)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.5
phage	P. simiae OR Antrim MOI 1	-0.5
motility	inner cut, LB soft agar motility assay	-0.5
seeds	Growth on radish seeds for 72 hours	-0.5
carbon source	D-Mannose (C)	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
phage	P. simiae OR Antrim MOI 10	-0.5
phage	JP1 MOI 1	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.4
carbon source	L-Arabinose (C)	-0.4
supernatant control	Vogels_fungal_media 0.1X	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.4
stress	Gentamicin 0.008 mg/ml	+0.4
phage	JP1 MOI 10	+0.4
stress	Doxycycline hyclate 0.001 mg/ml	+0.4
motility	inner cut, LB soft agar motility assay	+0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7
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