Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_01620
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-4.5
soil	soil sample 5; outgrowth in LB	-3.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-3.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	-3.0
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-3.0
root	root sample 6; outgrowth in LB	-2.6
soil	soil sample 3; outgrowth in LB	-2.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-2.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.0
stress	NaCl stress 250 mM	-2.0
liquid stress	Fraxetin 3 mM; liquid stress	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.8
motility	outer cut, LB soft agar motility assay	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7
solid stress	Fraxetin 0.5 mM; solid stress	-1.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.6
solid stress	Scopoletin 1 mM; solid stress	-1.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.5
motility	inner cut, LB soft agar motility assay	-1.5
motility	outer cut, LB soft agar motility assay	-1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.5
liquid stress	Fraxetin 3 mM; liquid stress	-1.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.4
carbon source	D-Glucose-6-Phosphate (C)	+2.8
carbon source	D-Glucose-6-Phosphate (C)	+4.5
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