Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_16185
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3
seeds	Growth on radish seeds for 24 hours	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
motility	outer cut, LB soft agar motility assay	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
phage	P. simiae OR Antrim MOI 10	-0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9
motility	inner cut, LB soft agar motility assay	-0.9
soil	soil sample 3; outgrowth in LB	-0.8
carbon source	2-Deoxy-D-Ribose (C)	-0.8
supernatant control	Vogels_fungal_media 0.1X	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7
stress	TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2	-0.7
phage	P. simiae Grant Run MOI 10	-0.6
stress	Nalidixic 0.025 mg/ml	-0.6
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.6
soil	soil sample 2; outgrowth in LB	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.6
phage	P. simiae ORA MOI 0.1	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7
carbon source	L-Valine (C)	+0.8
phage	JP1 MOI 1	+0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.8
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