Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15990
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
soil	soil sample 7; outgrowth in LB	-0.6
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6
stress	methylglyoxal 0.032 vol%	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
solid stress	80% Methanol 2 mM; solid stress	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
carbon source	Carbon source L-Citrulline 10 mM	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5
soil	soil sample 8; outgrowth in LB	-0.5
stress	Doxycycline hyclate 0.001 mg/ml	+0.5
solid stress	Fraxetin 3 mM; solid stress	+0.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.5
phage	P. simiae Grant Run MOI 0.1	+0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.5
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.6
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
solid stress	Scopoletin 2 mM; solid stress	+0.7
seeds	Growth on radish seeds for 72 hours	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+1.1
phage	JP1 MOI 1	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.4
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