Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15920
stress	methylglyoxal 0.032 vol%	-1.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0
carbon source	2'-Deoxyinosine 5 mM (C)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7
phage	P. simiae OR Antrim MOI 1	-0.6
phage	JP1 MOI 10	-0.6
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.6
soil	soil sample 6; outgrowth in LB	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.5
carbon source	L-Valine (C)	+0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.5
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.5
stress	1-ethyl-3-methylimidazolium chloride 200 mM	+0.5
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.6
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.6
stress	nitrate 200 mM	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+2.7
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