Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_15565
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.3
phage	JP1 MOI 10	-0.3
solid stress	Fraxetin 3 mM; solid stress	-0.3
phage	P. simiae Grant Run MOI 0.1	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.2
agar plate interaction control	Taped volatile agar plate with no fungus	-0.2
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.2
liquid stress	Fraxetin 1 mM; liquid stress	-0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
soil	soil sample 3; outgrowth in LB	+0.3
soil	soil sample 6; outgrowth in LB	+0.3
soil	soil sample 4; outgrowth in LB	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.3
solid stress	Fraxetin 2 mM; solid stress	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
soil	soil sample 5; outgrowth in LB	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
soil	soil sample 2; outgrowth in LB	+0.5
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.6
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.6
root	root sample 6; outgrowth in LB	+0.8
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