Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_14595
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.4
no phage control	Time6-nophage	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8
stress	Phosphomycin 0.002 mg/ml	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.7
seeds	Growth on radish seeds for 72 hours	-0.7
solid stress	Scopoletin 2 mM; solid stress	+0.6
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.6
ecofab	LB 0.5x in EcoFAB_3.5mL	+0.6
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.6
carbon source	D-Glucose-6-Phosphate (C)	+0.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.7
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.7
solid stress	Fraxetin 0.5 mM; solid stress	+0.7
carbon source	Deoxyribonucleic from herring sperm 5 mg/mL (C)	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.8
phage	P. simiae ORA MOI 1	+0.8
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	+0.9
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.9
carbon source	2'-Deoxyinosine 5 mM (C)	+1.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+2.1
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