Fitness for 1 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_14435
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.1
soil	soil sample 2; outgrowth in LB	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	-0.6
supernatant control	Vogels_fungal_media; pH 5.5	-0.6
solid stress	Fraxetin 0.5 mM; solid stress	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
carbon source	L-Valine (C)	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.5
soil	soil sample 8; outgrowth in LB	-0.5
carbon source	RCH2_defined_glucose with MS_media 1x	-0.5
liquid stress	80% Methanol 3 mM; liquid stress	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
stress	Cisplatin 0.01 mg/ml	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x	-0.5
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.5
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.5
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.5
agar plate interaction control	Taped volatile agar plate with no fungus	+0.5
phage	P. simiae ORA MOI 0.1	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5
carbon source	L-Leucine (C)	+0.6
seeds	Growth on radish seeds for 72 hours	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
carbon source	L-Valine (C)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
stress	methylglyoxal 0.032 vol%	+0.9
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